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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs2040811 chr19:15858720 C/G 0.00031 490 16.3 14.93 19.13 KM Plot
THCA rs2040812 chr19:15858767 G/A 7.5E-5 490 16.3 14.93 15.62 KM Plot
THCA rs2044291 chr2:55247954 A/G 0.000151 481 12.5 16.23 17.7 KM Plot
THCA rs2044857 chr11:96161951 G/A 0.000295 475 15.27 16.67 15.72 KM Plot
THCA rs2047440 chr10:70627831 G/A 1.21E-7 471 15.9 15.93 17.2 KM Plot
THCA rs2053015 chr3:127658086 C/T 0 490 16.37 14.93 5.92 KM Plot
THCA rs2058813 chr16:50129454 C/T 0.000257 490 15.67 16.37 13.6 KM Plot
THCA rs2060822 chr11:3931152 C/T 5.96E-6 485 34.1 14.8 15.9 KM Plot
THCA rs2060968 chr8:144603486 G/C 4.01E-11 474 16.88 15.13 6.07 KM Plot
THCA rs2064740 chr1:41514150 C/G 3.77E-12 488 17.7 17.73 14.93 KM Plot
THCA rs2069018 chr6:26205718 T/C 2.27E-8 486 15.3 17.23 4.75 KM Plot
THCA rs2069019 chr6:26205604 C/T 2.27E-8 486 15.3 17.23 4.75 KM Plot
THCA rs2069020 chr6:26205500 C/T 2.45E-8 483 15.32 17.23 4.75 KM Plot
THCA rs2071036 chr11:62620037 C/T 7.89E-5 490 16.23 14.17 14.27 KM Plot
THCA rs2071524 chr16:20787770 A/G 6.89E-5 490 16.58 14.8 16.37 KM Plot